Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Actin Cytoskeleton Organization (GO:0030036) Genes Targeted by hsa-mir-296-5p in AD Lung Bhattacharjee Cluster 41 Table contains all genes in the AD Lung Bhattacharjee cluster number 41. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-296-5p GO:0030036 27074 LAMP3 lysosomal-associated membrane protein 3 [Source:HGNC Symbol;Acc:14582] zzz999 8613 PPAP2B phosphatidic acid phosphatase type 2B [Source:HGNC Symbol;Acc:9229] T 5770 PTPN1 protein tyrosine phosphatase, non-receptor type 1 [Source:HGNC Symbol;Acc:9642] zzz999 1003 CDH5 cadherin 5, type 2 (vascular endothelium) [Source:HGNC Symbol;Acc:1764] T 975 CD81 CD81 molecule [Source:HGNC Symbol;Acc:1701] zzz999 9341 VAMP3 vesicle-associated membrane protein 3 (cellubrevin) [Source:HGNC Symbol;Acc:12644] zzz999 8692 HYAL2 hyaluronoglucosaminidase 2 [Source:HGNC Symbol;Acc:5321] zzz999 7454 WAS Wiskott-Aldrich syndrome (eczema-thrombocytopenia) [Source:HGNC Symbol;Acc:12731] zzz999 Yes 55958 KLHL9 kelch-like 9 (Drosophila) [Source:HGNC Symbol;Acc:18732] zzz999 7356 SCGB1A1 secretoglobin, family 1A, member 1 (uteroglobin) [Source:HGNC Symbol;Acc:12523] zzz999 11170 FAM107A family with sequence similarity 107, member A [Source:HGNC Symbol;Acc:30827] T 11346 SYNPO synaptopodin [Source:HGNC Symbol;Acc:30672] T Yes 6376 CX3CL1 chemokine (C-X3-C motif) ligand 1 [Source:HGNC Symbol;Acc:10647] T 7177 TPSAB1 tryptase alpha/beta 1 [Source:HGNC Symbol;Acc:12019] zzz999 10209 EIF1 eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249] zzz999 10516 FBLN5 fibulin 5 [Source:HGNC Symbol;Acc:3602] zzz999 7466 WFS1 Wolfram syndrome 1 (wolframin) [Source:HGNC Symbol;Acc:12762] zzz999 7940 LST1 leukocyte specific transcript 1 [Source:HGNC Symbol;Acc:14189] zzz999 847 CAT catalase [Source:HGNC Symbol;Acc:1516] T 4023 LPL lipoprotein lipase [Source:HGNC Symbol;Acc:6677] zzz999 2878 zzz999 zzz999 P T 8839 WISP2 WNT1 inducible signaling pathway protein 2 [Source:HGNC Symbol;Acc:12770] zzz999 11067 C10orf10 chromosome 10 open reading frame 10 [Source:HGNC Symbol;Acc:23355] zzz999 5348 FXYD1 FXYD domain containing ion transport regulator 1 [Source:HGNC Symbol;Acc:4025] zzz999 51208 CLDN18 claudin 18 [Source:HGNC Symbol;Acc:2039] zzz999 5420 PODXL podocalyxin-like [Source:HGNC Symbol;Acc:9171] T 7010 TEK TEK tyrosine kinase, endothelial [Source:HGNC Symbol;Acc:11724] zzz999 3040 HBA1 hemoglobin, alpha 1 [Source:HGNC Symbol;Acc:4823] zzz999 3043 HBB hemoglobin, beta [Source:HGNC Symbol;Acc:4827] zzz999 10395 DLC1 deleted in liver cancer 1 [Source:HGNC Symbol;Acc:2897] T Yes 2719 GPC3 glypican 3 [Source:HGNC Symbol;Acc:4451] zzz999 51552 RAB14 RAB14, member RAS oncogene family [Source:HGNC Symbol;Acc:16524] zzz999 2995 GYPC glycophorin C (Gerbich blood group) [Source:HGNC Symbol;Acc:4704] T 11217 AKAP2 A kinase (PRKA) anchor protein 2 [Source:HGNC Symbol;Acc:372] T 7123 CLEC3B C-type lectin domain family 3, member B [Source:HGNC Symbol;Acc:11891] zzz999 125 ADH1B alcohol dehydrogenase 1B (class I), beta polypeptide [Source:HGNC Symbol;Acc:250] zzz999 2615 LRRC32 leucine rich repeat containing 32 [Source:HGNC Symbol;Acc:4161] T 4239 MFAP4 microfibrillar-associated protein 4 [Source:HGNC Symbol;Acc:7035] T 8404 SPARCL1 SPARC-like 1 (hevin) [Source:HGNC Symbol;Acc:11220] zzz999 9732 DOCK4 dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:19192] zzz999 5175 PECAM1 platelet/endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:8823] zzz999 10628 TXNIP thioredoxin interacting protein [Source:HGNC Symbol;Acc:16952] zzz999 2013 EMP2 epithelial membrane protein 2 [Source:HGNC Symbol;Acc:3334] zzz999 6709 SPTAN1 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) [Source:HGNC Symbol;Acc:11273] zzz999 Yes 23673 STX12 syntaxin 12 [Source:HGNC Symbol;Acc:11430] T 79602 ADIPOR2 adiponectin receptor 2 [Source:HGNC Symbol;Acc:24041] zzz999 2040 STOM stomatin [Source:HGNC Symbol;Acc:3383] zzz999 9467 SH3BP5 SH3-domain binding protein 5 (BTK-associated) [Source:HGNC Symbol;Acc:10827] zzz999 10974 C10orf116 chromosome 10 open reading frame 116 [Source:HGNC Symbol;Acc:24043] T 23492 CBX7 chromobox homolog 7 [Source:HGNC Symbol;Acc:1557] T 6440 SFTPC surfactant protein C [Source:HGNC Symbol;Acc:10802] T 306 ANXA3 annexin A3 [Source:HGNC Symbol;Acc:541] zzz999 2308 FOXO1 forkhead box O1 [Source:HGNC Symbol;Acc:3819] zzz999 6256 RXRA retinoid X receptor, alpha [Source:HGNC Symbol;Acc:10477] T 64116 SLC39A8 solute carrier family 39 (zinc transporter), member 8 [Source:HGNC Symbol;Acc:20862] zzz999 5269 SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 [Source:HGNC Symbol;Acc:8950] T 284 ANGPT1 angiopoietin 1 [Source:HGNC Symbol;Acc:484] zzz999 23705 CADM1 cell adhesion molecule 1 [Source:HGNC Symbol;Acc:5951] zzz999 3730 KAL1 Kallmann syndrome 1 sequence [Source:HGNC Symbol;Acc:6211] zzz999 10908 PNPLA6 patatin-like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:16268] zzz999 857 CAV1 caveolin 1, caveolae protein, 22kDa [Source:HGNC Symbol;Acc:1527] zzz999 5168 ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:HGNC Symbol;Acc:3357] zzz999 8547 FCN3 ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen) [Source:HGNC Symbol;Acc:3625] zzz999 1359 CPA3 carboxypeptidase A3 (mast cell) [Source:HGNC Symbol;Acc:2298] zzz999 23710 GABARAPL1 GABA(A) receptor-associated protein like 1 [Source:HGNC Symbol;Acc:4068] zzz999 2869 GRK5 G protein-coupled receptor kinase 5 [Source:HGNC Symbol;Acc:4544] zzz999 51232 CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) [Source:HGNC Symbol;Acc:2359] zzz999 7433 VIPR1 vasoactive intestinal peptide receptor 1 [Source:HGNC Symbol;Acc:12694] T 6867 TACC1 transforming, acidic coiled-coil containing protein 1 [Source:HGNC Symbol;Acc:11522] zzz999 7049 TGFBR3 transforming growth factor, beta receptor III [Source:HGNC Symbol;Acc:11774] T 1346 COX7A1 cytochrome c oxidase subunit VIIa polypeptide 1 (muscle) [Source:HGNC Symbol;Acc:2287] zzz999 2934 GSN gelsolin [Source:HGNC Symbol;Acc:4620] T Yes 79026 AHNAK AHNAK nucleoprotein [Source:HGNC Symbol;Acc:347] zzz999 6844 VAMP2 vesicle-associated membrane protein 2 (synaptobrevin 2) [Source:HGNC Symbol;Acc:12643] T 8685 MARCO macrophage receptor with collagenous structure [Source:HGNC Symbol;Acc:6895] zzz999 2167 FABP4 fatty acid binding protein 4, adipocyte [Source:HGNC Symbol;Acc:3559] zzz999 2022 ENG endoglin [Source:HGNC Symbol;Acc:3349] T 166 AES amino-terminal enhancer of split [Source:HGNC Symbol;Acc:307] T 9806 SPOCK2 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 [Source:HGNC Symbol;Acc:13564] zzz999 762 CA4 carbonic anhydrase IV [Source:HGNC Symbol;Acc:1375] zzz999 6649 SOD3 superoxide dismutase 3, extracellular [Source:HGNC Symbol;Acc:11181] zzz999 1808 DPYSL2 dihydropyrimidinase-like 2 [Source:HGNC Symbol;Acc:3014] T 151011 SEPT10 septin 10 [Source:HGNC Symbol;Acc:14349] zzz999 7704 ZBTB16 zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:12930] zzz999 2273 FHL1 four and a half LIM domains 1 [Source:HGNC Symbol;Acc:3702] zzz999 10266 RAMP2 receptor (G protein-coupled) activity modifying protein 2 [Source:HGNC Symbol;Acc:9844] zzz999 25777 SUN2 Sad1 and UNC84 domain containing 2 [Source:HGNC Symbol;Acc:14210] T 1043 CD52 CD52 molecule [Source:HGNC Symbol;Acc:1804] zzz999 241 ALOX5AP arachidonate 5-lipoxygenase-activating protein [Source:HGNC Symbol;Acc:436] zzz999 387 RHOA ras homolog gene family, member A [Source:HGNC Symbol;Acc:667] zzz999 Yes 5730 PTGDS prostaglandin D2 synthase 21kDa (brain) [Source:HGNC Symbol;Acc:9592] zzz999 177 AGER advanced glycosylation end product-specific receptor [Source:HGNC Symbol;Acc:320] T 976 CD97 CD97 molecule [Source:HGNC Symbol;Acc:1711] zzz999 79987 SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:HGNC Symbol;Acc:15985] zzz999 687 KLF9 Kruppel-like factor 9 [Source:HGNC Symbol;Acc:1123] zzz999 6722 SRF serum response factor (c-fos serum response element-binding transcription factor) [Source:HGNC Symbol;Acc:11291] P T Yes 6237 RRAS related RAS viral (r-ras) oncogene homolog [Source:HGNC Symbol;Acc:10447] zzz999 3422 IDI1 isopentenyl-diphosphate delta isomerase 1 [Source:HGNC Symbol;Acc:5387] zzz999 2203 FBP1 fructose-1,6-bisphosphatase 1 [Source:HGNC Symbol;Acc:3606] zzz999 22998 LIMCH1 LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:29191] zzz999 Yes 8639 AOC3 amine oxidase, copper containing 3 (vascular adhesion protein 1) [Source:HGNC Symbol;Acc:550] zzz999 8425 LTBP4 latent transforming growth factor beta binding protein 4 [Source:HGNC Symbol;Acc:6717] T 1465 CSRP1 cysteine and glycine-rich protein 1 [Source:HGNC Symbol;Acc:2469] zzz999 1831 TSC22D3 TSC22 domain family, member 3 [Source:HGNC Symbol;Acc:3051] zzz999 3241 HPCAL1 hippocalcin-like 1 [Source:HGNC Symbol;Acc:5145] zzz999 3384 ICAM2 intercellular adhesion molecule 2 [Source:HGNC Symbol;Acc:5345] zzz999 53405 CLIC5 chloride intracellular channel 5 [Source:HGNC Symbol;Acc:13517] zzz999 2534 FYN FYN oncogene related to SRC, FGR, YES [Source:HGNC Symbol;Acc:4037] zzz999 9124 PDLIM1 PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:2067] zzz999 10268 RAMP3 receptor (G protein-coupled) activity modifying protein 3 [Source:HGNC Symbol;Acc:9845] T 6385 SDC4 syndecan 4 [Source:HGNC Symbol;Acc:10661] zzz999 Yes 4660 PPP1R12B protein phosphatase 1, regulatory (inhibitor) subunit 12B [Source:HGNC Symbol;Acc:7619] T 5187 PER1 period homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:8845] zzz999 7122 CLDN5 claudin 5 [Source:HGNC Symbol;Acc:2047] zzz999 7450 VWF von Willebrand factor [Source:HGNC Symbol;Acc:12726] zzz999 3554 IL1R1 interleukin 1 receptor, type I [Source:HGNC Symbol;Acc:5993] zzz999 1593 CYP27A1 cytochrome P450, family 27, subfamily A, polypeptide 1 [Source:HGNC Symbol;Acc:2605] zzz999 3949 LDLR low density lipoprotein receptor [Source:HGNC Symbol;Acc:6547] T 6397 SEC14L1 SEC14-like 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:10698] zzz999 896 CCND3 cyclin D3 [Source:HGNC Symbol;Acc:1585] T 9353 SLIT2 slit homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:11086] zzz999 Yes 6909 TBX2 T-box 2 [Source:HGNC Symbol;Acc:11597] T 91694 LONRF1 LON peptidase N-terminal domain and ring finger 1 [Source:HGNC Symbol;Acc:26302] zzz999 947 CD34 CD34 molecule [Source:HGNC Symbol;Acc:1662] T 730 C7 complement component 7 [Source:HGNC Symbol;Acc:1346] zzz999

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.